as_SummarizedExperiment() creates a `SummarizedExperiment` object from a `tbl` or `tidybulk` tbl formatted as | <SAMPLE> | <TRANSCRIPT> | <COUNT> | <...> |
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
# S4 method for spec_tbl_df
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
# S4 method for tbl_df
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
# S4 method for tidybulk
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
A tibble
The name of the sample column
The name of the transcript/gene column
The name of the transcript/gene abundance column
A `SummarizedExperiment` object
A `SummarizedExperiment` object
A `SummarizedExperiment` object
A `SummarizedExperiment` object