All functions

DATABASE_URL

URL pointing to the full metadata file

SAMPLE_DATABASE_URL

URL pointing to the sample metadata file, which is smaller and for test, demonstration, and vignette purposes only

get_SingleCellExperiment()

Gets a SingleCellExperiment from curated metadata

get_metadata()

Gets the Curated Atlas metadata as a data frame.

get_seurat()

Given a data frame of HCA metadata, returns a Seurat object corresponding to the samples in that data frame

get_single_cell_experiment()

Gets a SingleCellExperiment from curated metadata

get_unharmonised_dataset()

Returns unharmonised metadata for selected datasets.

get_unharmonised_metadata()

Returns unharmonised metadata for a metadata query