R/methods.R
, R/methods_SE.R
describe_transcript-methods.Rd
Get DESCRIPTION from gene SYMBOL for Human and Mouse
describe_transcript
describe_transcript
describe_transcript
describe_transcript
describe_transcript
describe_transcript
describe_transcript(.data, .transcript = NULL)
# S4 method for spec_tbl_df
describe_transcript(.data, .transcript = NULL)
# S4 method for tbl_df
describe_transcript(.data, .transcript = NULL)
# S4 method for tidybulk
describe_transcript(.data, .transcript = NULL)
.describe_transcript_SE(.data, .transcript = NULL)
# S4 method for SummarizedExperiment
describe_transcript(.data, .transcript = NULL)
# S4 method for RangedSummarizedExperiment
describe_transcript(.data, .transcript = NULL)
A tt or tbl object.
A character. The name of the gene symbol column.
A tbl
A consistent object (to the input) including additional columns for transcript symbol
A consistent object (to the input) including additional columns for transcript symbol
A consistent object (to the input) including additional columns for transcript symbol
A `SummarizedExperiment` object
A consistent object (to the input) including additional columns for transcript symbol
A consistent object (to the input) including additional columns for transcript symbol
describe_transcript(tidybulk::se_mini)
#> class: SummarizedExperiment
#> dim: 527 5
#> metadata(0):
#> assays(1): count
#> rownames(527): ABCB4 ABCB9 ... ZNF324 ZNF442
#> rowData names(2): entrez description
#> colnames(5): SRR1740034 SRR1740035 SRR1740043 SRR1740058 SRR1740067
#> colData names(5): Cell.type time condition days dead